Showing posts with label bacteria. Show all posts
Showing posts with label bacteria. Show all posts

13 Mar 2020

Wash your hands ... and DRY THEM, too.

By Simon Shapiro

We're being bombarded with the very sensible advice to wash our hands constantly. It's the first line of defense against the COVID-19 virus. And it's critical to wash properly: enough soap and water, lots of friction, spend 20 - 30 seconds (sing 'Happy Birthday' twice through) etc. But even after a diligent washing, your hands are probably not perfectly clean. After a less-than-diligent washing, your hands are definitely not perfectly clean. Drying them properly should also be part of the routine, for three reasons:
  1.  Drying your hands can remove some (or even most) of the residual bacteria and viruses.
  2. Wet or damp hands provide an environment that's good for residual bacteria and viruses (and therefore bad for us).
  3. Damp hands are more likely to transmit residual bacteria and viruses to other surfaces. 
In 2012 the Mayo Clinic published a survey of twelve studies looking at the effectiveness of different drying methods. Methods included cloth or paper towels, hot air dryers and jet dryers. (Jet dryers are the newer kind that use a strong, loud jet of unheated air).

Not all of the studies agreed with each other, but the overall conclusions are clear.
  • Towels and jet dryers get hands 96% dry in ten seconds. Hot air dryers need 40 seconds to get to that level.
  • We're usually in a hurry and don't take enough time to dry our hands. We spend 3-5 seconds on a towel and around 15 seconds on a hot air dryer. On average men are worse than women, and get to only 55% dryness on a hot air dryer; women average 68%. But both get to at least 90% using towels.
  • All methods are very effective if used properly. 
  The takeaway advice is clear:
  • Wash your hands frequently and carefully.
  • Dry them thoroughly every time. 
  • If you're using a multiple-use towel (as you likely are, at home), bear in mind that it's getting residual bacteria and viruses, so launder and change it frequently.

6 Mar 2020

Virus VS Bacteria — Know your enemy

Viruses and bacteria are the typical things that make us sick. But what are they? The first thing to know is that you can’t see them without a microscope. The second thing to know is that they find a great home in our bodies, where they can grow, reproduce, and spread to new hosts. But in the process, most of them make us very, very sick. Bacteria rots our food, too.

What do viruses and bacteria look like?

Viruses are different from bacteria in many ways, and not all viruses look alike. Bacteria don’t all look the same either. Here are some things that make them different.


 
the coat on some viruses looks spiky, like a ball of velcro
Virus

some bacteria have flagellum, a tail that helps them move
Bacteria

Size Smaller: 20–400 nm
Need an electron microscope to see them
Larger: 200–1000 nm
See them with a school microscope
Structure Protein coat only, no cell Single cell with a wall
Living/Non-Living Between living and non- Living organism
Reproduction Forces host cell to reproduce its DNA Reproduces on its own by splitting (fission)
Prevention Fight with vaccines and hand washing Fight with hand washing
Recovery from infection Heal with antiviral medications Heal with antibiotics

Images by Arek Socha from Pixabay.

How do you fight an infection of virus vs bacteria?

Viruses and bacteria that make a home in your body can make you sick. The solution for each is found right in the name: Anti-biotics fight the biotic, living bacteria. Anti-virals fight the viral infection caused by viruses. But not every virus and bacteria has a medicine to fight it.

An antibiotic cannot fight a virus, and vice versa.

Not all bacteria are killed by the same antibiotic medications.

Not all viruses are killed by the same antiviral medicines. Medicine has to be matched to the specific problem.
Amazing fact: Bacteria can catch a virus!
Some viruses can be prevented by taking a vaccine before you are exposed to the virus! Each vaccine fights a specific virus. Flu vaccines change every year to match the particular type of flu that is spreading that year, since flu (influenza) is a whole family of viruses. In Canada, most people take a group of vaccines when they are children, to prevent once-common deadly illnesses like chickenpox, measles, and mumps. When we travel to foreign places, we can take vaccines to prevent picking up viruses that are widespread there; hepatitis and malaria are common viruses that travellers get vaccinated against.

Animals get vaccinated against viruses such as rabies. Viruses and bacteria make animals sick too, but not always the same ones that make humans sick.

Your doctor will determine whether it is a virus or bacteria that is making you sick. Or it may be a different illness! They will prescribe the right medicine for the job, if that is an option.
Amazing fact: Some kinds of bacteria are good for you! Probiotics are an example of bacteria that are helpful in your stomach.

25 Mar 2016

Truth, the Internet, and the Number of Bacteria on Your Body


True Stuff cartoon Now Magazine Jan Thornhill

Before I started writing and illustrating kids' books, I did a weekly cartoon for Toronto's Now Magazine. I mined what I thought were entertaining factoids out of whatever I was reading or whoever I was listening to at the time, and illustrated these "truths" in scratchboard. I even called it, for a while, "True Stuff." 

Truth be told, I sometimes accepted as truth anecdotes told to me by other people, or things that came from dodgy sources such as supermarket tabloids. I admit, too, that I sometimes even made up some of what I drew. The above cartoon, however, was supposed to be one of the honest-to-gosh fact-based truths I'd come across and copied into my notebook. Perhaps you've heard or read something similar, something like "bacteria in the human body outnumber the body's own cells by 10:1."

child's microbe hand print
Tasha Sturm, a college microbiology tech, got her young son to gently
press his hand on a petri dish full of agar after he had been outside.
This is the fabulous collection of bacteria that grew! (photo: Tasha Sturm)

When I first came across this "teacupful" tidbit back in 1985, without the luxury of having everything at my internet-connected fingertips like I do today (even in the woods, even in the middle of the night, even a hundred miles from the closest big city), my fact-finding abilities were heavily reliant on what I read in books, newspapers, and magazines. Back then, I had to trust what I read, mostly because it was so very difficult to question the veracity of the printed word. How, back then, if I had questioned the trustworthiness my source, would I have been able to verify if it was true? I mean, even if something like the above statement about "a teacupful" of bacteria was sourced from, say, a research paper in an obscure journal, how would I, a non-academic, have been able to access such a thing back then? 

child's handprint bacteria
A close-up of the large flower-shaped colony from the above photo
that is probably made up of several million bacteria (Tasha Sturm)

My point is that back then, in the olden days before the internet, I had an excuse to repeat things that were sometimes untrue. Or at least more of an excuse than I have now. (I also seemed to have a heck of a lot more spare time back then, precisely because I didn't have easy access to so many of the scientific papers I now read—but that's a different story.) 

Back to the number of microbes on and inside a human body. I would never have fished out this old cartoon if I hadn't recently come across the following headline (on the internet, of course!): "Scientists bust myth that our bodies have more bacteria than human cells."

cut paper sculpture microbe Rogan Brown
Artist Rogan Brown's amazingly beautiful (and intricate!)
hand-cut paper sculpture of a bacterium  (Rogan Brown)

Here's the gist of what's come to light. This 10:1 bacteria-to-human-cell statistic, which gets almost nine thousand pre-2016 hits on Google, is based on a statement published in a review in 1977, a statement which had, in turn, been based on an earlier unsubstantiated calculation taken from a 1972 article. A group of researchers in Israel and Canada now say the ratio is more likely to be, on average, closer to one-to-one. Some people might have double that number of bacteria, some only half. And everyone loses almost their entire microbial load on a daily basis—at least they do if they're "regular," since the vast majority of human's bacteria reside in the colon. So the ten-to-one ratio is actually an academic urban legend.

But there's the rub: I haven't actually read the new study, nor have I read either the journal article or the review from the 1970s that I've cited in this post. Am I lazy, or is it reasonable for me to trust the distilled versions of the paper that have been published on the websites of the journal Nature, the National Geographic, and Scientific American, among others? I can't answer that. All I know is that it's getting harder and harder to figure out what is believable, not just on the internet, but also in contemporary books since so many are now based on internet research. I just hope I rehashed the gist of what I've been reading about the current research without garbling it too much—because I'm obviously as capable as anyone else of modifying what I've read when I rehash it.

Elin Thomas petri dish mold and bacteria art
Artist Elin Thomas uses felt and crochet to create petri
dishes packed with "moulds" and "bacteria." (Elin Thomas)

Take that original teacupful of bacteria "fact" I riffed off of all those years ago. Even with the mighty internet I cannot find a specific reference anywhere to "a teacupful" of bacteria on the human body. What I have found, though, are two separate references to the mass of all those trillions of bacteria found in humans equalling that of "a teacup Yorkie" or as being "roughly the same weight as a teacup chihuahua." Perhaps I was guilty way back then of dropping a qualifier in my copying down of this cool little factoid! 



More Academic Urban Legends:

If you think spinach is a rich source of iron, read this entertaining paper: 


Check out our very own Helaine Becker's UBC article that highlights an academic urban legend about how pearls are formedAnd if you happen to meet Helaine, ask her about Mendel's Peas.

More Information:

Directions for making a bacteria handprint in agar are contained in the Comments section of Tasha Sturm's original post on Microbeworld.org (N.B. Once the plates are grown they should NEVER be opened!!!!! The colonies on the plate can represent millions of bacteria that could potentially make someone sick. Mold also contains spores that could be inhaled causing serious problems as well.)

Rogan Brown's website with more dazzling cut-paper microbe art
Rogan discusses his science-based art in a short video

More of Elin Thomas's work on Flickr and on Etsy 

And if you want to know all about microbes and the human body, pre-order Inside Your Insides: A Guide to the Microbes That Call You Home, the latest book written by Sci/Why's own Claire Eamer (illustrated by Marie-Eve Tremblay)!

Inside your insides cover Claire Eamer

References



Ron Sender, Shai Fuchs, Ron Milo. Are We Really Vastly Outnumbered? Revisiting the Ratio of Bacterial to Host Cells in HumansCell, 2016; 164 (3): 337



22 Jan 2016

You and Your School Library Need These Books

by Helen Mason

I love reading Science books, especially those written for kids. That's because authors have to know a lot about their topic in order to distill the information into interesting and understandable communications that appeal to young readers. In the following titles, Jennifer Gardy and Tanya Lloyd Kyi make challenging scientific information readily available to young readers. These books should be in every elementary school library — and the collections of all teachers who hope to interest students in modern science.

It's Catching: The Infectious World of Germs and Microbes written by Jennifer Gardy and illustrated by Josh Holinaty (Owl Kids, 2014) uses a combination of text, visuals, and anecdotes to introduce readers to the many germs with which we share this planet.

The author, herself a disease detective, introduces past disease detectives, such as Antonie van Leeuwenhoek, the first person to see the microbial world. She explains that microbes exist both in the world around us and in our own bodies. Some of the details provide the necessary gross factor that kids love.

Without boring the reader, Grady outlines the difference between viruses, bacteria, fungi, and parasites. There's also a dangermeter for diseases that range from the common cold and influenza to malaria and ebola.

Discussing why doctors are so worried about parents who don't have their kids vaccinated against measles? Mention the 165 BCE measles plague that killed off about one-third of Rome's population. Have students of Irish descent? Suggest researching family trees to find out how many have ancestors who came to Canada following the 1845 Irish potato blight.

DNA Detective by Tanya Lloyd Kyi and illustrated by Lil Crump (Annick Press, 2015) is equally interesting. The intro draws kids right into the topic by showing a crime scene. Someone broke into a jewellery store and got away with valuable jewels. The perpetrator wore gloves. One was left at the scene. There are no other clues.

Readers will enjoy trying to pick the culprit from a list of suspects who include the store's manager, bookkeeper, custodian, and two cashiers, as well as three customers (two of them identical twin supermodels), a sales rep, a security guard, the owner of the store next door, and a convicted thief. They can follow the thinking processes of a young detective on her first case as she collects DNA evidence in an effort to identify the culprit. 

The author compares DNA identification to a high-tech fingerprint. Both can be inadvertently left behind and collected from crime scenes. The book includes profiles of past DNA rock stars, such as Gregor Mendel and Rosalind Franklin. A cartoon page or spread at the end of each section brings readers back to the crime in question. The detective outlines what she's learned. In most cases, readers can use this information to eliminate suspects. By the end, the detective — and readers — have their man — er, woman.

Books such as these provide excellent introductions to topics kids will continue to learn about throughout their student years — and likely their entire lives.

25 Jan 2014

My Stinky Sneakers

    Ewww...What is that smell? Were my socks washed in skunk juice? Did my feet turn into moldy cheese I don’t think so. It is my stinky sneakers.

I hold my nose when I take off my sneakers. My mom holds her nose too. My dog sniffs and quivers with delight. Why are my sneakers so smelly?


My stinky sneakers were not dropped in the garbage. They did not come from a manure factory. My sneakers stink because they have tiny creatures called bacteria (back-teer-ee-ah) living in them. It is not the sneakers that smell, it is the bacteria living in them. More precisely, it is not the bacteria in my sneakers that smell, it is their farts.

Your old shoes probably have smelly bacteria too.  But no matter how hard you or I look in our shoes, we will not see the bacteria. They are too small. We cannot see everything that is real.

Bacteria don’t just live in my sneakers… They live all over me, all over my body, inside and out. Bacteria live everywhere. On animals, on plants, in the air, in the soil, in the water. Bacteria live deep in the ground, on the ocean floor, on the top of Mount Everest, in the clouds, in the Antarctic ice.

The bacteria that live on my body are body bacteria. They like it warm, the temperature of me. Not all bacteria living on me are stinky. Some of them keep me healthy. I need them to help me make vitamins and keep my skin clean. But a few of the bacteria that live on my body can make me sick. Sometimes, my throat gets sore because too many bacteria are growing in my mouth.

Most bacteria just hang around, living on me like I live on the Earth. The stinky bacteria living in my sneakers are like that. There is more than one kind of bacteria living in my stinky sneakers. They have big names like Staphylococcus (Staff – ee – low –cock – us) and Propionibacteria (Pro – pee – on –ee – back – teer – ee – a). Stahylococcus are very small, and are shaped like a marble. Propionibacteria are shaped like jellybeans. These kinds of bacteria like to live where it is warm and dark. My sneakers are a perfect home.

My sneakers have something else that these bacteria love..lots of sweat to eat. Feet make a lot of sweat. Most people’s feet make more than a cup of sweat, every day. The sweat my feet makes soaks into my socks and into my sneakers. Sweat is mostly water, but there is also a little bit of salt and a little bit of sugar. Sneaker bacteria eat this salt and this sugar. It is their favorite food.

The more sweat in my sneakers, the more bacteria food. The bacteria grow and make even more bacteria. If there was a straight line of bacteria from my toe to my heel, there would be sixty thousand bacteria in a row. Lots of sweat makes crowds of bacteria. My sneakers are like a giant bacteria concert, like the Superbowl, or Times Square on New Year’s Eve.

My sweat does not smell. But when the bacteria in my stinky sneakers eat it, they sure leave behind smells when they finish dinner. In a way, it is like lots of minuscule bacteria farts. Phew!

Scientists are trying to grow a new kind of bacteria that eats sweat but does not make bad smells. This kind of bacteria would live in sneakers and clothes and eat up all the sweat and dirt. My sneakers would stay clean and never need to be washed. My mom says these scientists should hurry up.

Stinky sneakers mean that I have been playing and running. Stinky sneakers mean that I have been exercising and staying healthy. Stinky sneakers give my bacteria a place to live and food to eat.

When I get home, I take my stinky sneakers off. And I put my smelly socks in the laundry basket. And then I do the stink test.  I lift my leg in the air, point my toes at my sister and say, “smell my feet.” If she holds her nose or runs away, my feet are stinky too. And then I know…

...it is time to take a bath.

22 Mar 2013

Diving into an Alien World

By Claire Eamer

In a couple of months, I'll be touring schools and libraries in Ontario, talking about some of the marvellous and strange animals in my book, Lizards in the Sky: Animals Where You Least Expect Them. So I've been thinking about critters and presentations and cool pictures and things like that... and, well, one thing led to another, and I found a whole raft of new, cool, and utterly weird critters in one of my favourite habitats, the deep ocean.

The ROV Hercules operates deep in the Atlantic Ocean.
Photo credit: Mountains in the Sea Research Team;
the IFE Crew; and NOAA/OAR/OER

We're talking deep, here--really deep. So deep and so strange that exploring the deep ocean is like exploring an alien planet. In fact, you need the equivalent of a space ship to go to the deep ocean, something that can see in the absolute dark and survive pressures that would crush the toughest submarine.

But, oh, the wonders when you get there!

How about this? Five full kilometres below the sunny surface of the Caribbean Sea is the Cayman Trough. It's utterly dark and very cold down there, but not everywhere. Just last month, scientists released video taken by a remotely operated undersea vehicle. It shows mineral chimneys at tall as four-storey buildings, belching smoky black water as hot as 400 degrees Celsius, four times the boiling point of water.

Even more astounding were the creatures lurking around those vents: fireworms that look like woolly caterpillars and delicate, almost-colourless shrimp with special organs for detecting hot water.
Super-heated water and rocks billow up from an undersea
volcano in the Pacific Ocean near New Zealand.
Photo credit: Submarine ROF 2006, NOAA Vents Program.

Over in the Pacific Ocean, there's an even deeper spot--Challenger Deep in the Mariana Trench, on the west side of the Pacific. At about 12.5 kilometres, it's the deepest spot in all Earth's oceans. And even there, where the pressure is 1000 times the pressure we experience at Earth's surface--even there, you'll find life. A lot of it! Tiny life, to be sure--bacteria. But they swarm there far more densely than in the shallower water at the edge of the Trench.

You don't even have to go super-deep to find the super-weird. Over the last couple of years, scientists have been finding some spectacularly strange creatures in the ocean surrounding Antarctica. National Geographic compiled a list of the five weirdest Antarctic species, including a transparent fish and sea spiders that breathe through holes in their bodies.
This feather-pen-like coral lives almost 2.5 kilometres 
below the ocean surface at Davidson Seamount, California.
Photo credit: NOAA/Monterey Bay Aquarium Research Institute.

Not to be outdone, the biologist who writes one of my favourite science blogs, The Echinoblog, compiled a list of the ten weirdest Antarctic invertebrates. His list includes a 30-centimetre worm with serious teeth!

Me, I'm waiting eagerly for the next list--maybe longer and even weirder.

In the meantime, I guess I had better get back to what started all this, preparing some presentations about my own favourite weird beasties. Seeya!

30 Nov 2012

A Tribute to Scavengers and Decomposers


by Jan Thornhill

I visited a school a few days ago to talk about my books and, as usual, passed around the contents of my “museum-in-a-bag,” a collection of, among other things, skulls, dinosaur bones, desiccated insects, snake skins, feathers, and a mummified bat and two hummingbirds. The children are always very careful with my treasures, but that day my white-tailed deer skull finally snapped in half. I wasn’t exactly surprised, since this particular skull has been handled by at least 5,000 kids over the past few years. Besides, I can always glue it back together again. I’d like to save it, though, because, like many of the things in my bag, the deer skull has a story.
White-tailed deer skeleton (Jan Thornhill)

I found it, along with most of the rest of the deer’s skeleton behind a fence on my road. It’s not hard to imagine how the animal died: I’m sure someone struck it by accident with their car. Though mortally injured, it must have managed to make two great bounds, one to get off the road and the other to get over the fence. The person who hit it must have been relieved to see it disappear into the brush as he or she drove away. But then, alone, the deer collapsed and died.
A year earlier, I had looked for puffballs in exactly the same spot in late autumn. There were no deer remains then, so the longest it could have been hidden there was twelve months. Amazingly, other than a few wisps of hair and a couple of snippets of dried skin, the skeleton was completely clean – clean enough that I had no qualms about bringing it home.

So who do I have to thank for cleaning those bones for me? Scavengers and decomposers, that’s who – my favorite characters in the food chain.
I was quite sure a coyote must have visited the corpse of the deer shortly after it died since the bones of two of its legs were missing. The coyote is the only animal in my neighborhood that is strong enough to drag away such large parts. Though they’re predators, and often hunt for food, coyotes are also such frequent scavengers that they’ve developed a special receptor in their brains that makes them immediately throw up anything that is dangerously rotten. So a coyote wouldn’t have had to feed on the carcass immediately, especially if the deer had died in the cold of winter.
Coyote feeding on elk carcass (Courtesy Bryan Harry, U.S. Fish & Wildlife Service)
Turkey vulture
Other scavenging mammals, such as foxes and skunks, might also have visited the corpse, as well as birds, such as crows and vultures. Our local turkey vulture is one of the few large animals that is a dedicated scavenger, which means that its only food is carrion, or already dead or decaying flesh. They’re perfect for this job: they have an extremely well-developed sense of smell that allows them to home in on food that's miles away; their bald heads reduce the amount of rotting matter that might stick to them; strong acids in their digestive tracts destroy harmful bacteria; and their urine is also very acidic – and here’s the best part – so they pee down their legs to let the acid destroy nasty bacteria clinging to them. 
As well as being fed upon by these larger animals, in the warmer months corpses attract an amazing number of insects. A variety of flies are lured by the smell of death and lay their eggs. Their larvae, or maggots, are voracious carrion feeders. Flesh-eating beetle larvae continue the job and, later, other beetles with specialized mouth parts show up to feast on tough skin and ligaments, followed by moths that eat fur and hair. These insects all arrive at such specific stages of decomposition that forensic entomologists, scientists who study the insects that are found on or near dead things, can use their knowledge of this progression to determine the time of death when the remains of a human are found.
Close-up of a blowfly maggot (Eye of Science)
Throughout this whole process bacteria are active, gobbling up the corpse from within. These bacteria produce gases as a waste product, and it’s these gases that are responsible for the putrid odors that waft off rotting animals. Humans are naturally revolted by these smells, which is a good thing. If we weren’t disgusted by the smell of decomposition, we might be tempted to eat food that has gone bad and get sick from the bacteria growing on it. Interestingly, almost everyone in the world says the same thing when confronted by these smells, some version of “Yuck!” or “Ick!” This verbal gagging is so natural and so universal that some people think it might be the way that human language began.
My tip to anyone who finds an animal skull (or other bones) and wants to bring it home, is to use your eyes and nose. If it looks gross and smells disgusting, leave it where it is. Mark the location and return in a few months. More often than not, scavengers and decomposers will have completely cleaned it up for you.

You can find out lots more about death and decomposition in my book: I Found a Dead Bird: The Kids’ Guide to the Cycle of Life & Death (Maple Tree Press)
Here’s a fun, time-lapse video showing a watermelon decomposing over 35 days: http://thekidshouldseethis.com/post/12926682492